Index A | C | D | E | F | G | H | I | K | L | M | N | O | P | Q | R | S | T | U | V | W | X A aipw() (in module ehrapy.tools) autosave (ehrapy.settings attribute) autoshow (ehrapy.settings attribute) C cache_compression (ehrapy.settings attribute) cachedir (ehrapy.settings attribute) categories_to_ignore (ehrapy.settings attribute) catplot() (in module ehrapy.plot) causal_effect() (in module ehrapy.plot) CausalEstimate (class in ehrapy.tools) ci_lower (ehrapy.tools.CausalEstimate attribute) ci_upper (ehrapy.tools.CausalEstimate attribute) clip_quantile() (in module ehrapy.preprocessing) clustermap() (in module ehrapy.plot) CohortTracker (class in ehrapy.tools) combat() (in module ehrapy.preprocessing) covariate_balance() (in module ehrapy.tools) cox_ph() (in module ehrapy.tools) cox_ph_adjusted_curves() (in module ehrapy.plot) (in module ehrapy.tools) cox_ph_forestplot() (in module ehrapy.plot) D datasetdir (ehrapy.settings attribute) dendrogram() (in module ehrapy.plot) (in module ehrapy.tools) detect_bias() (in module ehrapy.preprocessing) diffmap() (in module ehrapy.plot) (in module ehrapy.tools) dotplot() (in module ehrapy.plot) dpt() (in module ehrapy.tools) dpt_groups_pseudotime() (in module ehrapy.plot) dpt_timeseries() (in module ehrapy.plot) draw_graph() (in module ehrapy.plot) (in module ehrapy.tools) E embedding() (in module ehrapy.plot) embedding_density() (in module ehrapy.plot) (in module ehrapy.tools) encode() (in module ehrapy.preprocessing) explicit_impute() (in module ehrapy.preprocessing) F figdir (ehrapy.settings attribute) file_format_data (ehrapy.settings attribute) file_format_figs (ehrapy.settings attribute) filter_features() (in module ehrapy.preprocessing) filter_observations() (in module ehrapy.preprocessing) filter_rank_features_groups() (in module ehrapy.tools) G g_computation() (in module ehrapy.tools) glm() (in module ehrapy.tools) H heatmap() (in module ehrapy.plot) highly_variable_features() (in module ehrapy.preprocessing) I ingest() (in module ehrapy.tools) iptw() (in module ehrapy.tools) K kaplan_meier() (in module ehrapy.plot) (in module ehrapy.tools) knn_impute() (in module ehrapy.preprocessing) L leiden() (in module ehrapy.tools) locf_impute() (in module ehrapy.preprocessing) log_logistic_aft() (in module ehrapy.tools) log_norm() (in module ehrapy.preprocessing) love_plot() (in module ehrapy.plot) M matrixplot() (in module ehrapy.plot) max_memory (ehrapy.settings attribute) maxabs_norm() (in module ehrapy.preprocessing) mcar_test() (in module ehrapy.preprocessing) method (ehrapy.tools.CausalEstimate attribute) mice_forest_impute() (in module ehrapy.preprocessing) minmax_norm() (in module ehrapy.preprocessing) miss_forest_impute() (in module ehrapy.preprocessing) missing_data_mask() (in module ehrapy.preprocessing) missing_values_barplot() (in module ehrapy.plot) missing_values_dendrogram() (in module ehrapy.plot) missing_values_heatmap() (in module ehrapy.plot) missing_values_matrix() (in module ehrapy.plot) N n (ehrapy.tools.CausalEstimate attribute) n_jobs (ehrapy.settings attribute) n_pcs (ehrapy.settings attribute) ncp() (in module ehrapy.plot) (in module ehrapy.tools) ncp_cluster_trajectories() (in module ehrapy.plot) neighbors() (in module ehrapy.preprocessing) nelson_aalen() (in module ehrapy.tools) O offset_negative_values() (in module ehrapy.preprocessing) ols() (in module ehrapy.plot) (in module ehrapy.tools) outcome (ehrapy.tools.CausalEstimate attribute) override() (ehrapy.settings method) P paga() (in module ehrapy.plot) (in module ehrapy.tools) paga_compare() (in module ehrapy.plot) paga_path() (in module ehrapy.plot) params (ehrapy.tools.CausalEstimate attribute) pca() (in module ehrapy.plot) (in module ehrapy.preprocessing) pca_loadings() (in module ehrapy.plot) pca_overview() (in module ehrapy.plot) pca_variance_ratio() (in module ehrapy.plot) plot_cohort_barplot() (ehrapy.tools.CohortTracker method) plot_flowchart() (ehrapy.tools.CohortTracker method) plot_suffix (ehrapy.settings attribute) positivity_check() (in module ehrapy.tools) power_norm() (in module ehrapy.preprocessing) propensity_overlap() (in module ehrapy.plot) propensity_score_matching() (in module ehrapy.tools) Q qc_lab_measurements() (in module ehrapy.preprocessing) qc_metrics() (in module ehrapy.preprocessing) quantile_norm() (in module ehrapy.preprocessing) R rank_features_groups() (in module ehrapy.plot) (in module ehrapy.tools) rank_features_groups_dotplot() (in module ehrapy.plot) rank_features_groups_heatmap() (in module ehrapy.plot) rank_features_groups_matrixplot() (in module ehrapy.plot) rank_features_groups_stacked_violin() (in module ehrapy.plot) rank_features_groups_tracksplot() (in module ehrapy.plot) rank_features_groups_violin() (in module ehrapy.plot) rank_features_supervised() (in module ehrapy.plot) (in module ehrapy.tools) ranking() (in module ehrapy.plot) regress_out() (in module ehrapy.preprocessing) robust_scale_norm() (in module ehrapy.preprocessing) S s_learner() (in module ehrapy.tools) sample() (in module ehrapy.preprocessing) sankey_diagram() (in module ehrapy.plot) sankey_diagram_time() (in module ehrapy.plot) scale_norm() (in module ehrapy.preprocessing) scatter() (in module ehrapy.plot) se (ehrapy.tools.CausalEstimate attribute) settings (in module ehrapy) simple_impute() (in module ehrapy.preprocessing) stacked_violin() (in module ehrapy.plot) stratified_table_one() (in module ehrapy.plot) (in module ehrapy.tools) summarize_measurements() (in module ehrapy.preprocessing) summary() (ehrapy.tools.CausalEstimate method) T t_learner() (in module ehrapy.tools) test_kmf_logrank() (in module ehrapy.tools) test_nested_f_statistic() (in module ehrapy.tools) timeseries() (in module ehrapy.plot) tracked_steps (ehrapy.tools.CohortTracker attribute) tracked_tables (ehrapy.tools.CohortTracker attribute) tracksplot() (in module ehrapy.plot) treatment (ehrapy.tools.CausalEstimate attribute) tsne() (in module ehrapy.plot) (in module ehrapy.tools) U umap() (in module ehrapy.plot) (in module ehrapy.tools) V value (ehrapy.tools.CausalEstimate attribute) variable_correlations() (in module ehrapy.plot) (in module ehrapy.preprocessing) variable_dependencies() (in module ehrapy.plot) verbosity (ehrapy.settings attribute) violin() (in module ehrapy.plot) W weibull() (in module ehrapy.tools) weibull_aft() (in module ehrapy.tools) winsorize() (in module ehrapy.preprocessing) writedir (ehrapy.settings attribute) X x_learner() (in module ehrapy.tools)
