ehrapy is a modular open-source Python framework designed for exploratory end-to-end analysis of heterogeneous epidemiology and electronic health record data.

Installation

New to ehrapy? Check out the installation guide.

Installation

API reference

The API reference contains a detailed description of the ehrapy API.

API

Tutorials

The tutorials walk you through real-world applications of ehrapy.

Tutorials

Discussion

Need help? Reach out on our forum to get your questions answered!

https://discourse.scverse.org/

GitHub

Find a bug? Interested in improving ehrapy? Checkout our GitHub for the latest developments.

https://github.com/theislab/ehrapy

Citation

Exploratory electronic health record analysis with ehrapy Lukas Heumos, Philipp Ehmele, Tim Treis, Julius Upmeier zu Belzen, Altana Namsaraeva, Nastassya Horlava, Vladimir A. Shitov, Xinyue Zhang, Luke Zappia, Rainer Knoll, Niklas J. Lang, Leon Hetzel, Isaac Virshup, Lisa Sikkema, Eljas Roellin, Fabiola Curion, Roland Eils, Herbert B. Schiller, Anne Hilgendorff, Fabian J. Theis medRxiv 2023.12.11.23299816; doi: https://doi.org/10.1101/2023.12.11.23299816 .

Indices and tables

• Index

• Module Index

• Search Page